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    If you are relatively newly diagnosed you may be lactose intolerant. Many celiacs (assuming you are celiac) are lactose intolerant at least until they are healed up. Caffeine can also irritate the GI tract before you're healed as well.  ...
    Chris, have you had the complete celiac panel??
    It’s certainly possible.  Coffee and susbstances made from cow’s milk are common intolerances in Celiacs due the upset of your autoimmune system.